Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015940146.1_cds_XP_016484472.1_75485
CDS Infomation

[gene=LOC107805016] [db_xref=GeneID:107805016] [protein=serine carboxypeptidase-like] [protein_id=XP_016484472.1] [location=complement(join(39194..39441,39690..39948,40152..40240,40335..40485,40604..40747,40859..40978,41445..41613,41710..42047))] [gbkey=CDS]
Sequence

ATGCCTTCATCTTTCTCTCTTCTCTTTCTTACTCTGCTTCTTGCTTCTATTTCCTTATCT
TTCTCATCAACTTTAAATTCTAATGATGATGATTTTTTCCTATCTTCTACTCCAAAATTC
CCATTAACAATGGCAGAAAAGCTAATCAGACAGCTTAATTTATTCCCTAAGCATGATATC
AACAAGGCTGCAGCAACAGGGGATTCTGCAGCAGTTACTGAACAGAGACTTTTTGAAAAG
AAATTGAATTTATCTTATGTTGGTAATTCTGGGTCTACAGTTCAAGACTTGGGTCATCAC
GCTGGTTATTATCGTCTTCCACATACTAAAGATGCAAGGATGTTTTACTTTTTCTTTGAA
TCGAGGAGCAGGAAGAATGATCCAGTAGTTATATGGCTAACTGGAGGGCCAGGATGTAGC
AGTGAATTGGCTGTGTTTTATGAAAATGGACCATTCAAAATTGCAGATAACATGTCTCTT
GTCTGGAATGATTTCGGCTGGGACAAGGTCTCAAATCTTATATACGTCGATCAGCCAACT
GGAACTGGTTTCAGTTATAGTTCAAACGATGATGATATTCGTCACGATGAAAGGGGCGTA
AGCAATGATCTCTATGACTTCTTGCAGGCCTTCTTCAAGGCACATCCACAGTATGCAAAA
AATGATTTCTATATTACTGGAGAATCATATGCTGGGCATTACATTCCTGCATTTGCTTCT
CGGGTTCACCAAGGAAACAAAAATAAAGAAGGAATCTACGTAAATCTCAAGGGATTTGCT
ATTGGTAATGGACTCACTGATCCAGAAATTCAATACAAAGCCTACACTGACTATGCTCTG
GATATGAAATTGATCAAAAAATCTGATTACAATGCCATAGAGAAGTCATATCCAAAATGT
CAACTAGCAATTAAGCTTTGTGGAAAAGATGGCGGAACTGCTTGCATGGCTGCATATCTT
GTTTGTACAAGCATCTTCAACAAGATTATGGACATTGCTGGTGACAAAAACTACTATGAT
GTGCGGAAGAGATGTGAGGGCGATCTATGCTATGATTTCTCCAAAATGGAAACTTTCCTC
AATGATCAACAAGTTAAAAAGGCTCTTGGTGTTGGGGATATTGAGTTTGTTTCATGTAGC
TCTGAAGTTTACCAGGCAATGCAGTTGGACTGGATGAGGAATCTTGAATTGGGAATTCCT
TCACTCCTTGAGGATGGTATCAAGCTACTAGTGTATGCTGGGGAATATGACCTTATCTGC
AATTGGCTTGGGAATTCGAGATGGGTGCATGCAATGAAATGGACAGGGCAAAAAGCCTTT
GGAAAAGCCACACAAGTTTCTTTTGCAGTAGATGGTGTAGAGAAAGGAGTTCAAAAAAAC
TATGGACCTTTAACTTTCCTTAAGGTCCATGATGCAGGTCACATGGTTCCAATGGATCAG
CCTAAGGCAGCAATGGAAATGCTTCAGAGGTGGATGCAAGATAAATTGTCTAAAGAAGGT
CATCTTGCTCCTATGTGA

Peptide Sequence

PEP ID

XP_016484472.1
PEP Infomation

PREDICTED: serine carboxypeptidase-like [Nicotiana tabacum]
Sequence

MPSSFSLLFLTLLLASISLSFSSTLNSNDDDFFLSSTPKFPLTMAEKLIRQLNLFPKHDI
NKAAATGDSAAVTEQRLFEKKLNLSYVGNSGSTVQDLGHHAGYYRLPHTKDARMFYFFFE
SRSRKNDPVVIWLTGGPGCSSELAVFYENGPFKIADNMSLVWNDFGWDKVSNLIYVDQPT
GTGFSYSSNDDDIRHDERGVSNDLYDFLQAFFKAHPQYAKNDFYITGESYAGHYIPAFAS
RVHQGNKNKEGIYVNLKGFAIGNGLTDPEIQYKAYTDYALDMKLIKKSDYNAIEKSYPKC
QLAIKLCGKDGGTACMAAYLVCTSIFNKIMDIAGDKNYYDVRKRCEGDLCYDFSKMETFL
NDQQVKKALGVGDIEFVSCSSEVYQAMQLDWMRNLELGIPSLLEDGIKLLVYAGEYDLIC
NWLGNSRWVHAMKWTGQKAFGKATQVSFAVDGVEKGVQKNYGPLTFLKVHDAGHMVPMDQ
PKAAMEMLQRWMQDKLSKEGHLAPM

Transcript Sequence

Gene sequence data has not been registered.